aroma.affymetrix

This forum is an archive for the mailing list aroma-affymetrix@googlegroups.com (more options) Messages posted here will be sent to this mailing list.
12345 ... 13
Topics (452)
Replies Last Post Views
[aroma.affymetrix] segmented copy number to 'per gene' calls by thomas.grombacher
0
by thomas.grombacher
[aroma.affymetrix] "How to: Create a CDF file from Bioconductor Platform Design (PD) Info package" is miserably failing by Guillaume Devailly
2
by Guillaume Devailly
[aroma.affymetrix] MeDIP pipeline? by bruce moran
1
by Guillaume Devailly
[aroma.affymetrix] Filtering in FIRMA by Marijke Van Moerbeke
1
by Henrik Bengtsson-4
[aroma.affymetrix] Analysis of the HTA 2.0 Data by Marijke Van Moerbeke
0
by Marijke Van Moerbeke
[aroma.affymetrix] Implementation of DABG for HTAv2 by Angel Rubio
0
by Angel Rubio
[aroma.affymetrix] Affymetrix HuGene exon expression values / splicing by rene.rotterdam-2
0
by rene.rotterdam-2
[aroma.affymetrix] Getting error with AffymetrixCdfFile$fromChipType command by anarayan
1
by Henrik Bengtsson-6
[aroma.affymetrix] median normalization of LRR afer doing CRMA v2 and ACNE by hongen xu
0
by hongen xu
[aroma.affymetrix] doCRMAv2 vs individual normalization steps by Arshi Arora
1
by Henrik Bengtsson-6
[aroma.affymetrix] Changing the Aroma settings (RMA MedianPolish threshold ) in the latest version of the aroma.affymetrix by San
3
by Henrik Bengtsson
[aroma.affymetrix] HuEx-1_0-st-v2 gcRMA by Tim Sweeney
1
by Tim Sweeney
[aroma.affymetrix] mufColumns on genes with more than 500 probes across the gene by Iain
1
by Mark Robinson-3
[aroma.affymetrix] cfit error while doCRMAv2 by arshi
6
by Henrik Bengtsson
[aroma.affymetrix] extract LRR and BAF from ACNE results by hongen xu
2
by hongen xu
[aroma.affymetrix] Adjusting for sample-specific median signal prior to segmentation by Benilton Carvalho
1
by Henrik Bengtsson
[aroma.affymetrix] from doASCRMAv2 to extractTotalAndFreqB by Georg
1
by Georg
[aroma.affymetrix] Trouble Getting Mouse annotations after FIRMA run. by Sam Danziger
1
by Rishi Das Roy
[aroma.affymetrix] Error when calling doCRMAv2 by Georg
1
by Henrik Bengtsson
[aroma.affymetrix] brainarray ENSG or ENST to perform FIRMA by Rishi Das Roy
0
by Rishi Das Roy
[aroma.affymetrix] annotation file update by Francois
1
by Henrik Bengtsson
[aroma.affymetrix] strange result from PSCBS by Chengyu Liu
9
by Henrik Bengtsson-3
[aroma.affymetrix] Error when running PSCBS by Chengyu Liu
0
by Chengyu Liu
[aroma.affymetrix] Errors occurred in the PSCBS analysis by Chengyu Liu
2
by Chengyu Liu
[aroma.affymetrix] !!!!!!DO NOT CLICK THE WHATSAPP EMAIL . It seems like a virus !!!!!!!!!!!!!!!!!!!! by Elsa Chacko
0
by Elsa Chacko
[aroma.affymetrix] Don't go until... by Elsa Chacko
0
by Elsa Chacko
[aroma.affymetrix] After running doCRMAv2, I got chromosome 24,25 by Chengyu Liu
2
by Chengyu Liu
[aroma.affymetrix] Regarding the copy number states and further processing by Sam Padmanabhuni
13
by Sam Padmanabhuni
[aroma.affymetrix] sfit by Juanjo Lozano
3
by Juanjo Lozano
[aroma.affymetrix] Does exportTotalCnRatioSet function calculate Allelic-specific copy numbers ? by Chengyu Liu
1
by Chengyu Liu
[aroma.affymetrix] fit CBS model error by Jerry Liu
5
by Henrik Bengtsson-3
[aroma.affymetrix] Questions on extracting probeset summaries by Qingzhou Zhang
11
by Qingzhou Zhang
[aroma.affymetrix] aroma.affymetrix v2.13.0 released by Henrik Bengtsson
0
by Henrik Bengtsson
[aroma.affymetrix] Regarding vignette about How to: Calculate total copy number ratios from from total (non-polymorphic by Chengyu Liu
0
by Chengyu Liu
[aroma.affymetrix] How to smooth after CRMAv2 and before CBS using PSCBS by Chengyu Liu
0
by Chengyu Liu
12345 ... 13